BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB029A11LP1|AL429007
(902 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig972 1172 0.0
3x_Contig1229 575 e-164
>3x_Contig972
Length = 5081
Score = 1172 bits (591), Expect = 0.0
Identities = 594/595 (99%)
Strand = Plus / Plus
Query: 1 atggagaatcttttaaagcctcgtttacatcatccagatttagacccaatgaatgttatt 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 4484 atggagaatcttttaaagcctcgtttaaatcatccagatttagacccaatgaatgttatt 4543
Query: 61 ttaaaagaagatgatgatgttccttacttattggactttgaaggatcatccattaagcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4544 ttaaaagaagatgatgatgttccttacttattggactttgaaggatcatccattaagcct 4603
Query: 121 tacattttacaaaacactcctcaatttgttgcctacgatggaccaaaaatctatgaccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4604 tacattttacaaaacactcctcaatttgttgcctacgatggaccaaaaatctatgaccta 4663
Query: 181 gaaaaggatattgaagggtacaaggacatggaagaatcggaaaaagccaaacttgagttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4664 gaaaaggatattgaagggtacaaggacatggaagaatcggaaaaagccaaacttgagttc 4723
Query: 241 atgtacaagcgtactcgtaaccagtttttatgggagtttgctttaaatgaaaacttacct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4724 atgtacaagcgtactcgtaaccagtttttatgggagtttgctttaaatgaaaacttacct 4783
Query: 301 gaattgatctcttctgtcgctccaccaatcaaagttttgagaaacccttatgtggctgcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4784 gaattgatctcttctgtcgctccaccaatcaaagttttgagaaacccttatgtggctgcc 4843
Query: 361 atcgaaagaaagtccgacgaagaataccttttgattgaagaagctcttcttcaattggct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4844 atcgaaagaaagtccgacgaagaataccttttgattgaagaagctcttcttcaattggct 4903
Query: 421 gaagtctggccgatcttcgctaataacaaattagtaaatgccgctgaatacccactaaaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4904 gaagtctggccgatcttcgctaataacaaattagtaaatgccgctgaatacccactaaaa 4963
Query: 481 tattccgaagaagaagtcaaaaagcatgctgatgcattgaacgcttatcatgagaaactg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4964 tattccgaagaagaagtcaaaaagcatgctgatgcattgaacgcttatcatgagaaactg 5023
Query: 541 atttcccaaccatttgccgctacccaaggatggatgccacaagatatgtttgata 595
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5024 atttcccaaccatttgccgctacccaaggatggatgccacaagatatgtttgata 5078
>3x_Contig1229
Length = 4630
Score = 575 bits (290), Expect = e-164
Identities = 303/306 (99%), Gaps = 1/306 (0%)
Strand = Plus / Minus
Query: 598 ctagttcaaggtggcattttggtaaaaaatgagaaaggagattacgttatttctcgcacg 657
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 4624 ctagttcaaggtggcattttggtaaaaaatgagaaaggagattttgttatttctcgcacg 4565
Query: 658 -gaagatgcctaaatctgcgaacagacttttcttcttgtaaataaatattctgaacaact 716
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4564 agaagatgcctaaatctgcgaacagacttttcttcttgtaaataaatattctgaacaact 4505
Query: 717 ctatagctataaatttttttgccttcctggtttacagcagaggagcgttcttgtgaccat 776
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4504 ctatagctataaatttttttgccttcctggtttacagcagaggagcgttcttgtgaccat 4445
Query: 777 cattatatgaaatcaaagaatgttggcctaatttcctgtattatccagtttaagctatga 836
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4444 cattatatgaaatcaaagaatgttggcctaatttcctgtattatccagtttaagctatga 4385
Query: 837 aattctaaatttccatttatgctaaaataactccaacaattactatcataatatctggct 896
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4384 aattctaaatttccatttatgctaaaataactccaacaattactatcataatatctggct 4325
Query: 897 gggttt 902
||||||
Sbjct: 4324 gggttt 4319
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8127
Number of Sequences: 1807
Number of extensions: 8127
Number of successful extensions: 54
Number of sequences better than 1.0e-20: 2
length of query: 902
length of database: 10,358,551
effective HSP length: 16
effective length of query: 886
effective length of database: 10,329,639
effective search space: 9152060154
effective search space used: 9152060154
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)